MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0430 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
napA (requalified) — DUF3263 domain-containing protein napA Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 sodC (family_assigned) — superoxide dismutase family protein sodC Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv3258c (dark) — hypothetical protein Rv3258c mshD (requalified) — mycothiol synthase mshD Rv2242 (family_assigned) — PucR family transcriptional regulator Rv2242 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2732c (family_assigned) — hypothetical protein Rv2732c lppL (family_assigned) — hypothetical protein lppL ggtA (requalified) — bifunctional cephalosporin acylase/gamma-glutamylt ggtA ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA pepN (requalified) — aminopeptidase PepN pepN pepB (requalified) — leucyl aminopeptidase pepB Rv2876 (requalified) — transmembrane protein Rv2876 qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1278 (family_assigned) — AAA family ATPase Rv1278 rplU (requalified) — 50S ribosomal protein L21 rplU tig (requalified) — trigger factor tig rplV (requalified) — 50S ribosomal protein L22 rplV rplI (requalified) — 50S ribosomal protein L9 rplI rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ argB (requalified) — acetylglutamate kinase argB argA (requalified) — amino-acid N-acetyltransferase argA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gdh (requalified) — NAD-glutamate dehydrogenase gdh mutY (requalified) — A/G-specific adenine glycosylase mutY lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN end (requalified) — deoxyribonuclease IV end Rv3259 (family_assigned) — metallopeptidase family protein Rv3259 Rv3587c (family_assigned) — hypothetical protein Rv3587c fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC Rv0007 (dark) — DUF3566 domain-containing protein Rv0007

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.