MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0428c · 46 genes shown · anchor def · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ argB (requalified) — acetylglutamate kinase argB argA (requalified) — amino-acid N-acetyltransferase argA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gdh (requalified) — NAD-glutamate dehydrogenase gdh def (requalified) — peptide deformylase def xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv0495c (family_assigned) — hypothetical protein Rv0495c napA (requalified) — DUF3263 domain-containing protein napA sodC (family_assigned) — superoxide dismutase family protein sodC Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 argD (requalified) — acetylornithine transaminase argD argF (requalified) — ornithine carbamoyltransferase argF argC (requalified) — N-acetyl-gamma-glutamyl-phosphate reductase argC argR (requalified) — arginine repressor argR argG (requalified) — argininosuccinate synthase argG pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 ilvD (requalified) — dihydroxy-acid dehydratase ilvD leuA (requalified) — 2-isopropylmalate synthase leuA ilvE (requalified) — branched-chain amino acid aminotransferase ilvE ald (requalified) — alanine dehydrogenase ald Rv2475c (family_assigned) — thioesterase family protein Rv2475c rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA garA (requalified) — glycogen accumulation regulator GarA garA gltD (family_assigned) — glutamate synthase subunit beta gltD glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 rplU (requalified) — 50S ribosomal protein L21 rplU tig (requalified) — trigger factor tig rplV (requalified) — 50S ribosomal protein L22 rplV rplI (requalified) — 50S ribosomal protein L9 rplI rplQ (requalified) — 50S ribosomal protein L17 rplQ rplD (requalified) — 50S ribosomal protein L4 rplD mutY (requalified) — A/G-specific adenine glycosylase mutY lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN end (requalified) — deoxyribonuclease IV end Rv0499 (family_assigned) — thioesterase family protein Rv0499 proC (requalified) — pyrroline-5-carboxylate reductase proC Rv2616 (family_assigned) — DUF1990 family protein Rv2616 Rv3818 (requalified) — MBL fold metallo-hydrolase Rv3818 Rv0497 (family_assigned) — hypothetical protein Rv0497 Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv2876 (requalified) — transmembrane protein Rv2876 qcrA (requalified) — hypothetical protein qcrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.