MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0419 · 44 genes shown · anchor lpqL · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqM (requalified) — neutral zinc metallopeptidase lpqM lpqL (family_assigned) — M28 family metallopeptidase lpqL Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2980 (dark) — DUF3515 domain-containing protein Rv2980 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2049c (family_assigned) — hypothetical protein Rv2049c cei (requalified) — envelope integrity protein Cei cei Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 lpqW (requalified) — lipoarabinomannan biosynthesis protein LpqW lpqW lipT (requalified) — carboxylesterase LipT lipT thiS (requalified) — sulfur carrier protein ThiS thiS otsB2 (requalified) — trehalose-phosphatase otsB2 Rv0881 (requalified) — RNA methyltransferase Rv0881 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c Rv0431 (requalified) — tuberculin-like peptide Rv0431 rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv1489 (family_assigned) — hypothetical protein Rv1489 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv2743c (family_assigned) — hypothetical protein Rv2743c rsbW (requalified) — anti-sigma B factor RsbW rsbW octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv3415c (family_assigned) — hypothetical protein Rv3415c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.