MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0409 · 46 genes shown · anchor pta · open gene page → · ← back to 1 hop

Evidence: Min score 0
ackA (requalified) — acetate kinase ackA pta (requalified) — phosphate acetyltransferase pta acs (requalified) — acetate--CoA ligase acs pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd aldA (requalified) — aldehyde dehydrogenase aldA Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 icl1 (requalified) — isocitrate lyase icl1 acyP (requalified) — acylphosphatase acyP fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 glcB (requalified) — malate synthase G glcB Rv0406c (family_assigned) — beta lactamase-like protein Rv0406c Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC citA (requalified) — citrate synthase 2 citA Rv3292 (family_assigned) — VOC family protein Rv3292 gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT fadB (requalified) — fatty oxidation protein FadB fadB adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0770 (requalified) — NAD(P)-dependent oxidoreductase Rv0770 adhB (requalified) — alcohol dehydrogenase B adhB cyp123 (requalified) — cytochrome P450 cyp123 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 Rv0459 (family_assigned) — DUF779 domain-containing protein Rv0459 adh (requalified) — zinc-binding dehydrogenase adh mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 aceAb (requalified) — isocitrate lyase AceAb aceAb aceAa (requalified) — isocitrate lyase AceAa aceAa acn (requalified) — iron-regulated aconitate hydratase Acn acn Rv3175 (requalified) — amidase Rv3175 amiB2 (requalified) — amidase amiB2 amiA2 (requalified) — amidase amiA2 amiD (requalified) — amidase amiD amiC (requalified) — amidase amiC Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 truA (requalified) — tRNA pseudouridine synthase A truA Rv2367c (requalified) — endoribonuclease Rv2367c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.