MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0400c · 46 genes shown · anchor lpqK · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 ltp1 (requalified) — lipid-transfer protein ltp1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadB (requalified) — fatty oxidation protein FadB fadB fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 Rv0398c (family_assigned) — hypothetical protein Rv0398c lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK echA9 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA9 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 accD2 (family_assigned) — acyl-CoA carboxylase subunit beta accD2 Rv0976c (family_assigned) — acyclic terpene utilization AtuA family protein Rv0976c accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2 echA7 (family_assigned) — enoyl-CoA hydratase family protein echA7 fadE12 (requalified) — acyl-CoA dehydrogenase fadE12 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 echA6 (requalified) — enoyl-CoA hydratase echA6 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB aceE (requalified) — pyruvate dehydrogenase E1 component aceE sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA fadE36 (family_assigned) — phosphotransferase family protein fadE36 echA14 (requalified) — enoyl-CoA hydratase echA14 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC gcvH (requalified) — glycine cleavage system protein GcvH gcvH echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 echA16 (requalified) — enoyl-CoA hydratase echA16 Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 Rv0907 (family_assigned) — hypothetical protein Rv0907 otsB2 (requalified) — trehalose-phosphatase otsB2 Rv2305 (family_assigned) — hypothetical protein Rv2305 echA8 (requalified) — enoyl-CoA hydratase echA8 mmsB (requalified) — 3-hydroxyisobutyrate dehydrogenase mmsB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.