MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0392c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ndhA (requalified) — NAD(P)/FAD-dependent oxidoreductase ndhA Rv2531c (requalified) — amino acid decarboxylase Rv2531c Rv0393 (family_assigned) — hypothetical protein Rv0393 ppa (requalified) — inorganic diphosphatase ppa gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 mdh (requalified) — malate dehydrogenase mdh qcrA (requalified) — hypothetical protein qcrA cydB (family_assigned) — cytochrome d ubiquinol oxidase subunit II cydB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpsO (requalified) — 30S ribosomal protein S15 rpsO vapB39 (requalified) — antitoxin VapB39 vapB39 arcA (requalified) — arginine deiminase arcA argH (requalified) — argininosuccinate lyase argH Rv1722 (requalified) — biotin carboxylase Rv1722 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv3467 (family_assigned) — hypothetical protein Rv3467 Rv1148c (family_assigned) — hypothetical protein Rv1148c atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD pgk (requalified) — phosphoglycerate kinase pgk eno (requalified) — phosphopyruvate hydratase eno serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 fba (requalified) — class II fructose-bisphosphate aldolase fba pgi (requalified) — glucose-6-phosphate isomerase pgi serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 nuoK (family_assigned) — NADH-quinone oxidoreductase subunit NuoK nuoK nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.