MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0388c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE9 (family_assigned) — PPE family protein PPE9 PPE9 Rv0387c (family_assigned) — Conserved hypothetical protein Rv0387c purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv0390 (family_assigned) — rhodanese-like domain-containing protein Rv0390 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ Rv1146 (requalified) — transmembrane transport protein Rv1146 PE_PGRS40 (family_assigned) — PE-PGRS family protein PE_PGRS40 PE_PGRS40 PE_PGRS57 (family_assigned) — PE-PGRS family protein PE_PGRS57 PE_PGRS57 PE_PGRS22 (family_assigned) — PE-PGRS family protein PE_PGRS22 PE_PGRS22 PE_PGRS59 (family_assigned) — PE-PGRS family protein PE_PGRS59 PE_PGRS59 PE_PGRS54 (family_assigned) — PE-PGRS family protein PE_PGRS54 PE_PGRS54 PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 PE_PGRS47 (family_assigned) — PE-PGRS family protein PE_PGRS47 PE_PGRS47 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 serS (requalified) — serine--tRNA ligase serS Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c lysS (requalified) — lysine--tRNA ligase lysS purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purD (requalified) — phosphoribosylamine--glycine ligase purD purN (requalified) — phosphoribosylglycinamide formyltransferase purN glyA1 (requalified) — serine hydroxymethyltransferase glyA1 sodA (requalified) — superoxide dismutase sodA Rv2367c (requalified) — endoribonuclease Rv2367c rplQ (requalified) — 50S ribosomal protein L17 rplQ rplM (requalified) — 50S ribosomal protein L13 rplM cbs (requalified) — cystathionine beta-synthase cbs metH (requalified) — methionine synthase metH cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 rslA (requalified) — anti-sigma-L factor RslA rslA Rv2714 (family_assigned) — PAC2 family protein Rv2714 mmpL11 (requalified) — RND transporter MmpL11 mmpL11 Rv2370c (family_assigned) — PucR family transcriptional regulator Rv2370c phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv2365c (requalified) — cytidine deaminase Rv2365c Rv2369c (dark) — hypothetical protein Rv2369c Rv2366c (family_assigned) — hemolysin family protein Rv2366c fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.