MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0387c · 35 genes shown · anchor PPE9 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0387c (family_assigned) — Conserved hypothetical protein Rv0387c PPE9 (family_assigned) — PPE family protein PPE9 PPE9 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 serS (requalified) — serine--tRNA ligase serS Rv2738c (family_assigned) — DUF3046 domain-containing protein Rv2738c lysS (requalified) — lysine--tRNA ligase lysS purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv0390 (family_assigned) — rhodanese-like domain-containing protein Rv0390 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ Rv1146 (requalified) — transmembrane transport protein Rv1146 PE_PGRS40 (family_assigned) — PE-PGRS family protein PE_PGRS40 PE_PGRS40 Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2083 (dark) — hypothetical protein Rv2083 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2084 (dark) — hypothetical protein Rv2084 cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 valS (requalified) — valine--tRNA ligase valS yidD (requalified) — membrane protein insertion efficiency factor YidD yidD Rv2739c (requalified) — glycosyltransferase Rv2739c ephG (requalified) — epoxide hydrolase ephG recX (requalified) — recombination regulator RecX recX recA (requalified) — intein-containing recombinase RecA recA whiB3 (family_assigned) — redox-responsive transcriptional regulator WhiB3 whiB3 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX gltS (requalified) — glutamate--tRNA ligase gltS ileS (requalified) — isoleucine--tRNA ligase ileS guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA argS (requalified) — arginine--tRNA ligase argS metS (requalified) — methionine--tRNA ligase metS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.