MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0386 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0386 (family_assigned) — LuxR family transcriptional regulator Rv0386 Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv3728 (requalified) — MFS transporter Rv3728 Rv3239c (requalified) — MFS transporter Rv3239c devS (requalified) — two-component system sensor histidine kinase DevS devS Rv2565 (family_assigned) — patatin-like phospholipase family protein Rv2565 Rv3899c (family_assigned) — hypothetical protein Rv3899c crp (family_assigned) — cAMP-activated global transcriptional regulator CR crp cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv0998 (family_assigned) — GNAT family N-acetyltransferase Rv0998 Rv2435c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv2435c nrtS (requalified) — nitrate/nitrite transporter NrtS nrtS Rv2432c (dark) — hypothetical protein Rv2432c Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdD (family_assigned) — fumarate reductase subunit FrdD frdD Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2563 (family_assigned) — ABC transporter permease Rv2563 Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv2562 (family_assigned) — Conserved hypothetical protein Rv2562 Rv0393 (family_assigned) — hypothetical protein Rv0393 Rv2561 (family_assigned) — Conserved hypothetical protein Rv2561 cysS1 (requalified) — cysteine--tRNA ligase cysS1 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 Rv3238c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv3238c nadE (requalified) — NAD(+) synthase nadE pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 devR (requalified) — two-component system response regulator DevR devR Rv3134c (requalified) — universal stress protein Rv3134c Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.