MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0380c · 46 genes shown · anchor pyrE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0380c (requalified) — RNA methyltransferase Rv0380c Rv0381c (dark) — hypothetical protein Rv0381c pyrE (requalified) — orotate phosphoribosyltransferase pyrE rsfS (requalified) — ribosome silencing factor rsfS rplQ (requalified) — 50S ribosomal protein L17 rplQ rplU (requalified) — 50S ribosomal protein L21 rplU rplO (requalified) — 50S ribosomal protein L15 rplO ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA rplK (requalified) — 50S ribosomal protein L11 rplK rplM (requalified) — 50S ribosomal protein L13 rplM rplX (requalified) — 50S ribosomal protein L24 rplX rplC (requalified) — 50S ribosomal protein L3 rplC clpB (requalified) — chaperone protein ClpB clpB Rv0365c (family_assigned) — glycoside hydrolase family 76 protein Rv0365c pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD pyrC (requalified) — dihydroorotase pyrC carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB prsA (requalified) — ribose-phosphate diphosphokinase prsA rplN (requalified) — 50S ribosomal protein L14 rplN nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD rplS (requalified) — 50S ribosomal protein L19 rplS rpmA (requalified) — 50S ribosomal protein L27 rpmA rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsI (requalified) — 30S ribosomal protein S9 rpsI rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmE (requalified) — 50S ribosomal protein L31 rpmE rplR (requalified) — 50S ribosomal protein L18 rplR rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0500B (family_assigned) — Conserved hypothetical protein Rv0500B rplA (requalified) — 50S ribosomal protein L1 rplA rplD (requalified) — 50S ribosomal protein L4 rplD rplF (requalified) — 50S ribosomal protein L6 rplF dnaK (requalified) — molecular chaperone DnaK dnaK grpE (requalified) — nucleotide exchange factor GrpE grpE clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.