MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0377 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c embR (requalified) — response regulator transcription factor EmbR embR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0376c (family_assigned) — hypothetical protein Rv0376c moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv0371c (family_assigned) — NTP transferase domain-containing protein Rv0371c Rv0373c (family_assigned) — aerobic carbon-monoxide dehydrogenase large subuni Rv0373c Rv0374c (family_assigned) — (2Fe-2S)-binding protein Rv0374c Rv0370c (family_assigned) — MoxR family ATPase Rv0370c Rv0369c (requalified) — membrane oxidoreductase Rv0369c Rv0894 (family_assigned) — hypothetical protein Rv0894 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1724c (dark) — hypothetical protein Rv1724c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ kdpE (requalified) — two-component system response regulator KdpE kdpE Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1359 (family_assigned) — transcriptional regulator Rv1359 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv0345 (family_assigned) — hypothetical protein Rv0345 Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3162c (family_assigned) — integral membrane protein Rv3162c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.