MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0340 · 46 genes shown · anchor iniR · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0340 (family_assigned) — Rv0340 family IniB-related protein Rv0340 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR iniB (requalified) — isoniazid-induced protein IniB iniB gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC iniA (requalified) — isoniazid inductible protein IniA iniA arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA Rv1288 (requalified) — esterase Rv1288 Rv1754c (requalified) — DUF4185 domain-containing protein Rv1754c Rv3668c (requalified) — protease Rv3668c chiZ (requalified) — cell wall hydrolase ChiZ chiZ hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL Rv1592c (family_assigned) — lipase family protein Rv1592c embR (requalified) — response regulator transcription factor EmbR embR mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2209 (requalified) — MFS transporter Rv2209 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA mfpA (requalified) — pentapeptide repeat protein MfpA mfpA Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 recF (requalified) — DNA replication/repair protein RecF recF dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv0004 (requalified) — DNA replication protein DciA Rv0004 rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsI (requalified) — 30S ribosomal protein S9 rpsI Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv2264c (family_assigned) — Hsp70 family protein Rv2264c Rv3835 (family_assigned) — septum formation family protein Rv3835 arfC (family_assigned) — hypothetical protein arfC Rv0898c (family_assigned) — DUF2630 family protein Rv0898c arfB (family_assigned) — hypothetical protein arfB Rv0897c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0897c Rv1157c (dark) — hypothetical protein Rv1157c Rv1287 (family_assigned) — RrF2 family transcriptional regulator Rv1287 Rv1289 (family_assigned) — hypothetical protein Rv1289 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.