MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0338c · 46 genes shown · anchor aspC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0338c (requalified) — heterodisulfide reductase-related iron-sulfur bind Rv0338c rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB nusA (requalified) — transcription termination factor NusA nusA gltB (family_assigned) — glutamate synthase large subunit gltB iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI aroB (requalified) — 3-dehydroquinate synthase aroB Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 pgk (requalified) — phosphoglycerate kinase pgk tpi (requalified) — triose-phosphate isomerase tpi fba (requalified) — class II fructose-bisphosphate aldolase fba eno (requalified) — phosphopyruvate hydratase eno pgi (requalified) — glucose-6-phosphate isomerase pgi tkt (requalified) — transketolase tkt ilvD (requalified) — dihydroxy-acid dehydratase ilvD leuA (requalified) — 2-isopropylmalate synthase leuA argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ ilvE (requalified) — branched-chain amino acid aminotransferase ilvE gdh (requalified) — NAD-glutamate dehydrogenase gdh ald (requalified) — alanine dehydrogenase ald fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 rimP (requalified) — ribosome maturation factor RimP rimP rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplK (requalified) — 50S ribosomal protein L11 rplK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.