MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0332 · 46 genes shown · anchor rmlA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c Rv0333 (family_assigned) — nuclear transport factor 2 family protein Rv0333 rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA plsC (family_assigned) — HAD-IB family hydrolase plsC Rv0941c (family_assigned) — STAS domain-containing protein Rv0941c Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 ramB (family_assigned) — acetate metabolism transcriptional regulator RamB ramB Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv2514c (family_assigned) — DUF4411 family protein Rv2514c Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2516c (dark) — hypothetical protein Rv2516c rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU sirA (requalified) — sulfite reductase sirA metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 aao (requalified) — FAD-dependent oxidoreductase aao galE1 (requalified) — UDP-glucose 4-epimerase galE1 Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c galE2 (family_assigned) — SDR family oxidoreductase galE2 glf (requalified) — UDP-galactopyranose mutase glf Rv2484c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2484c plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 Rv2481c (family_assigned) — hypothetical protein Rv2481c plsB1 (requalified) — lysophospholipid acyltransferase plsB1 hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF ettA (requalified) — energy-dependent translational throttle protein Et ettA Rv1906c (family_assigned) — hypothetical protein Rv1906c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv3351c (family_assigned) — hypothetical protein Rv3351c Rv1203c (family_assigned) — hypothetical protein Rv1203c Rv2016 (dark) — hypothetical protein Rv2016

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.