MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0316 · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv0314c (family_assigned) — membrane protein Rv0314c Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 pirG (requalified) — exported repetitive protein pirG Rv3707c (requalified) — hypothetical protein Rv3707c Rv1987 (family_assigned) — cellulose-binding protein Rv1987 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2209 (requalified) — MFS transporter Rv2209 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv0329c (requalified) — class I SAM-dependent methyltransferase Rv0329c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 iniB (requalified) — isoniazid-induced protein IniB iniB PPE5 (family_assigned) — PPE family protein PPE5 PPE5 Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c scoA (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit A scoA accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadB (requalified) — fatty oxidation protein FadB fadB accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 PPE40 (family_assigned) — PPE family protein PPE40 PPE40 PPE24 (family_assigned) — PPE family protein PPE24 PPE24

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.