MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0309 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0309 (requalified) — L%2CD-transpeptidase Rv0309 Rv0308 (family_assigned) — phosphatase PAP2 family protein Rv0308 Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 Rv0307c (family_assigned) — hypothetical protein Rv0307c Rv0185 (family_assigned) — TIGR04338 family metallohydrolase Rv0185 Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 Rv1702c (requalified) — HNH endonuclease signature motif containing protei Rv1702c mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1148c (family_assigned) — hypothetical protein Rv1148c rplF (requalified) — 50S ribosomal protein L6 rplF lprE (family_assigned) — LppP/LprE family lipoprotein lprE cyp140 (requalified) — cytochrome P450 cyp140 cyp136 (requalified) — cytochrome P450 cyp136 atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA bluB (requalified) — 5%2C6-dimethylbenzimidazole synthase bluB Rv0296c (requalified) — sulfatase Rv0296c bglS (requalified) — beta-glucosidase BglS bglS Rv0183 (requalified) — monoacylglycerol lipase Rv0183 Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB radA (requalified) — DNA repair protein RadA radA Rv3035 (family_assigned) — hypothetical protein Rv3035 recA (requalified) — intein-containing recombinase RecA recA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv0094c (family_assigned) — hypothetical protein Rv0094c Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv3467 (family_assigned) — hypothetical protein Rv3467 Rv3354 (requalified) — DUF732 domain-containing protein Rv3354 mmpS4 (requalified) — siderophore RND transporter accessory protein MmpS mmpS4 Rv0449c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0449c lppX (requalified) — LppX_LprAFG lipoprotein lppX

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.