MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0302 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv1534 (family_assigned) — TetR family transcriptional regulator Rv1534 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv0067c (family_assigned) — helix-turn-helix domain-containing protein Rv0067c Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 fas (requalified) — fatty acid synthase fas Rv0296c (requalified) — sulfatase Rv0296c Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 htpG (requalified) — molecular chaperone HtpG htpG Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 Rv1533 (family_assigned) — nitronate monooxygenase family protein Rv1533 Rv1532c (family_assigned) — PaaI family thioesterase Rv1532c Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 Rv3239c (requalified) — MFS transporter Rv3239c mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 espB (requalified) — type VII secretion system ESX-1 target EspB espB vapC15 (family_assigned) — PIN domain nuclease vapC15 espI (family_assigned) — MinD/ParA family protein espI esxA (requalified) — ESAT-6 protein EsxA esxA eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv3161c (family_assigned) — aromatic ring-hydroxylating dioxygenase subunit al Rv3161c Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.