MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0299 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC2 (family_assigned) — PIN domain nuclease vapC2 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 Rv0910 (family_assigned) — SRPBCC family protein Rv0910 Rv3749c (family_assigned) — hypothetical protein Rv3749c Rv3750c (requalified) — excisionase Rv3750c Rv0461 (requalified) — transmembrane protein Rv0461 Rv0909 (requalified) — antitoxin Rv0909 vapC15 (family_assigned) — PIN domain nuclease vapC15 Rv3354 (requalified) — DUF732 domain-containing protein Rv3354 Rv3103c (dark) — hypothetical protein Rv3103c glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv0986 (family_assigned) — ABC transporter ATP-binding protein Rv0986 Rv0296c (requalified) — sulfatase Rv0296c Rv1534 (family_assigned) — TetR family transcriptional regulator Rv1534 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 fas (requalified) — fatty acid synthase fas Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 htpG (requalified) — molecular chaperone HtpG htpG vapB48 (requalified) — antitoxin VapB48 vapB48 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 glpK (requalified) — glycerol kinase GlpK glpK Rv3698 (family_assigned) — hypothetical protein Rv3698 Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 lpqE (family_assigned) — hypothetical protein lpqE Rv0826 (family_assigned) — oxygenase MpaB family protein Rv0826 Rv1645c (family_assigned) — oxygenase MpaB family protein Rv1645c Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c Rv2310 (requalified) — excisionase Rv2310 Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE Rv2022c (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv2022c Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.