MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0291 · 30 genes shown · anchor eccD3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 esxH (requalified) — type VII secretion system effector EsxH esxH esxG (requalified) — type VII secretion system protein EsxG esxG ctpF (requalified) — cation-transporting P-type ATPase ctpF PE5 (family_assigned) — PE family protein PE5 PE5 cut2 (family_assigned) — cutinase family protein cut2 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 esxS (requalified) — ESAT-6 like protein EsxS esxS esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB esxR (family_assigned) — WXG100 family type VII secretion target esxR esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ Rv2625c (family_assigned) — site-2 protease family protein Rv2625c pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB Rv2028c (requalified) — universal stress protein Rv2028c Rv2624c (requalified) — universal stress protein Rv2624c Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX Rv1278 (family_assigned) — AAA family ATPase Rv1278 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv1277 (family_assigned) — hypothetical protein Rv1277 nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.