MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0290 · 26 genes shown · anchor eccB3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 esxG (requalified) — type VII secretion system protein EsxG esxG eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 esxH (requalified) — type VII secretion system effector EsxH esxH eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxR (family_assigned) — WXG100 family type VII secretion target esxR esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 PE5 (family_assigned) — PE family protein PE5 PE5 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.