MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0282 · 30 genes shown · anchor eccB3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 PE5 (family_assigned) — PE family protein PE5 PE5 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 PPE3 (family_assigned) — PPE family protein PPE3 PPE3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 glpK (requalified) — glycerol kinase GlpK glpK prcA (family_assigned) — proteasome subunit alpha prcA prcB (family_assigned) — proteasome subunit beta prcB eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 esxG (requalified) — type VII secretion system protein EsxG esxG esxH (requalified) — type VII secretion system effector EsxH esxH Rv2990c (requalified) — class I SAM-dependent methyltransferase Rv2990c Rv0106 (family_assigned) — GTP-binding protein Rv0106 rpmB2 (requalified) — 50S ribosomal protein L28 rpmB2 Rv2059 (family_assigned) — hypothetical protein Rv2059 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 mpa (requalified) — proteasome ATPase mpa mec (requalified) — CysO-cysteine peptidase mec glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 pup (family_assigned) — ubiquitin-like protein Pup pup bpa (requalified) — proteasome activator protein Bpa bpa dop (requalified) — pup deamidase/depupylase dop pafA (requalified) — Pup--protein ligase pafA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.