MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0281 · 33 genes shown · anchor eccC3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 PPE3 (family_assigned) — PPE family protein PPE3 PPE3 Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 PE5 (family_assigned) — PE family protein PE5 PE5 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 esxG (requalified) — type VII secretion system protein EsxG esxG pptT (requalified) — 4'-phosphopantetheinyl transferase pptT eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 Rv2990c (requalified) — class I SAM-dependent methyltransferase Rv2990c Rv0106 (family_assigned) — GTP-binding protein Rv0106 rpmB2 (requalified) — 50S ribosomal protein L28 rpmB2 Rv2059 (family_assigned) — hypothetical protein Rv2059 Rv2750 (family_assigned) — Rv2750 family mycofactocin-dependent SDR oxidoredu Rv2750 Rv2749 (family_assigned) — putative quinol monooxygenase Rv2749 Rv1896c (requalified) — class I SAM-dependent methyltransferase Rv1896c Rv3767c (requalified) — class I SAM-dependent methyltransferase Rv3767c Rv0893c (requalified) — class I SAM-dependent methyltransferase Rv0893c eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 esxH (requalified) — type VII secretion system effector EsxH esxH esxR (family_assigned) — WXG100 family type VII secretion target esxR esxQ (requalified) — type VII secretion system ESX-3 effector EsxQ esxQ Rv2795c (requalified) — metallophosphoesterase Rv2795c truB (requalified) — tRNA pseudouridine(55) synthase TruB truB mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ltp1 (requalified) — lipid-transfer protein ltp1 pks13 (requalified) — polyketide synthase Pks13 pks13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.