MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0273c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 kdpE (requalified) — two-component system response regulator KdpE kdpE Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c cobB (requalified) — NAD-dependent protein deacylase cobB sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR fadE6 (family_assigned) — acyl-CoA dehydrogenase family protein fadE6 Rv0311 (family_assigned) — hypothetical protein Rv0311 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv0767c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0767c nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv3368c (family_assigned) — nitroreductase family protein Rv3368c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 moxR2 (family_assigned) — MoxR family ATPase moxR2 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB mprB (requalified) — two-component system sensor histidine kinase MprB mprB Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3162c (family_assigned) — integral membrane protein Rv3162c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.