MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0268c · 45 genes shown · anchor fadD2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0268c (family_assigned) — hypothetical protein Rv0268c relK (family_assigned) — Txe/YoeB family addiction module toxin relK Rv0269c (requalified) — DNA polymerase domain-containing protein Rv0269c fadD2 (requalified) — long-chain-fatty-acid--CoA ligase FadD2 fadD2 Rv0366c (family_assigned) — zeta toxin family protein Rv0366c mazE3 (requalified) — antitoxin MazE3 mazE3 Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c Rv2514c (family_assigned) — DUF4411 family protein Rv2514c Rv2022c (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv2022c Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF Rv3359 (requalified) — NADH:flavin oxidoreductase Rv3359 folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD ligC (requalified) — ATP-dependent DNA ligase ligC mku (requalified) — Ku protein mku ligB (requalified) — ATP-dependent DNA ligase ligB Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c rplF (requalified) — 50S ribosomal protein L6 rplF pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC Rv0367c (family_assigned) — hypothetical protein Rv0367c Rv0365c (family_assigned) — glycoside hydrolase family 76 protein Rv0365c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0369c (requalified) — membrane oxidoreductase Rv0369c ramB (family_assigned) — acetate metabolism transcriptional regulator RamB ramB mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 Rv1101c (family_assigned) — AI-2E family transporter Rv1101c mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 mazF7 (requalified) — mRNA interferase MazF7 mazF7 Rv2016 (dark) — hypothetical protein Rv2016 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv2011c (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2011c php (requalified) — phosphotriesterase-related protein php

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.