MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0259c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0259c (family_assigned) — sirohydrochlorin chelatase Rv0259c Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG narK3 (requalified) — nitrate/nitrite transporter narK3 Rv0258c (requalified) — hypothetical protein Rv0258c Rv1372 (family_assigned) — alpha-pyrone synthesis polyketide synthase-like pr Rv1372 nirD (family_assigned) — nitrite reductase small subunit NirD nirD Rv3909 (dark) — hypothetical protein Rv3909 nirB (family_assigned) — nitrite reductase large subunit NirB nirB aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 cysC (requalified) — adenylyl-sulfate kinase cysC sirA (requalified) — sulfite reductase sirA hemC (requalified) — hydroxymethylbilane synthase hemC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemE (requalified) — uroporphyrinogen decarboxylase hemE cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ narH (family_assigned) — nitrate reductase subunit beta narH narG (family_assigned) — nitrate reductase subunit alpha narG narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narI (family_assigned) — respiratory nitrate reductase subunit gamma narI narK2 (requalified) — nitrate transporter NarK narK2 rsfB (family_assigned) — STAS domain-containing protein rsfB lpqM (requalified) — neutral zinc metallopeptidase lpqM Rv0941c (family_assigned) — STAS domain-containing protein Rv0941c Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 Rv1139c (family_assigned) — isoprenylcysteine carboxyl methyltransferase famil Rv1139c Rv1373 (requalified) — glycolipid sulfotransferase Rv1373 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c Rv3835 (family_assigned) — septum formation family protein Rv3835 narK1 (requalified) — nitrate/nitrite transporter narK1 Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c mmpL11 (requalified) — RND transporter MmpL11 mmpL11 Rv1101c (family_assigned) — AI-2E family transporter Rv1101c ftsQ (requalified) — cell division protein FtsQ ftsQ eno (requalified) — phosphopyruvate hydratase eno

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.