MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0258c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0258c (requalified) — hypothetical protein Rv0258c Rv0259c (family_assigned) — sirohydrochlorin chelatase Rv0259c Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c rsfB (family_assigned) — STAS domain-containing protein rsfB lpqM (requalified) — neutral zinc metallopeptidase lpqM Rv0941c (family_assigned) — STAS domain-containing protein Rv0941c Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 narK3 (requalified) — nitrate/nitrite transporter narK3 Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 Rv2114 (dark) — hypothetical protein Rv2114 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG Rv1372 (family_assigned) — alpha-pyrone synthesis polyketide synthase-like pr Rv1372 nirD (family_assigned) — nitrite reductase small subunit NirD nirD hemC (requalified) — hydroxymethylbilane synthase hemC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemE (requalified) — uroporphyrinogen decarboxylase hemE Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC mkl (family_assigned) — ABC transporter ATP-binding protein mkl lpqL (family_assigned) — M28 family metallopeptidase lpqL Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2980 (dark) — DUF3515 domain-containing protein Rv2980 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1906c (family_assigned) — hypothetical protein Rv1906c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv3351c (family_assigned) — hypothetical protein Rv3351c Rv1203c (family_assigned) — hypothetical protein Rv1203c hsr1 (requalified) — hypothetical protein hsr1 Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv2598 (family_assigned) — DUF2617 family protein Rv2598 rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 narH (family_assigned) — nitrate reductase subunit beta narH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.