MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0254c · 31 genes shown · anchor cobT · open gene page → · ← back to 1 hop

Evidence: Min score 0
cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobQ1 (requalified) — cobyric acid synthase cobQ1 cobD (requalified) — cobalamin biosynthesis protein cobD cobO (requalified) — cob(I)alamin adenosyltransferase cobO Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ PPE2 (family_assigned) — PPE family protein PPE2 PPE2 cobH (requalified) — precorrin-8X methylmutase cobH cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c bluB (requalified) — 5%2C6-dimethylbenzimidazole synthase bluB Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c cobN (family_assigned) — cobaltochelatase subunit CobN cobN cobC (requalified) — aminotransferase cobC cobK (requalified) — cobalt-precorrin-6A reductase cobK cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL cobG (requalified) — precorrin-3B synthase cobG pirG (requalified) — exported repetitive protein pirG eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv2134c (dark) — hypothetical protein Rv2134c Rv2136c (requalified) — undecaprenyl-diphosphate phosphatase Rv2136c Rv2137c (dark) — hypothetical protein Rv2137c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC gpgP (requalified) — glucosyl-3-phosphoglycerate phosphatase gpgP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.