MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0252 · 24 genes shown · anchor nirD · open gene page → · ← back to 1 hop

Evidence: Min score 0
nirB (family_assigned) — nitrite reductase large subunit NirB nirB nirD (family_assigned) — nitrite reductase small subunit NirD nirD narG (family_assigned) — nitrate reductase subunit alpha narG narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU narK3 (requalified) — nitrate/nitrite transporter narK3 narK1 (requalified) — nitrate/nitrite transporter narK1 narH (family_assigned) — nitrate reductase subunit beta narH narK2 (requalified) — nitrate transporter NarK narK2 narI (family_assigned) — respiratory nitrate reductase subunit gamma narI glnA2 (family_assigned) — glutamine synthetase family protein glnA2 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 glnA4 (family_assigned) — glutamine synthetase family protein glnA4 narJ (family_assigned) — nitrate reductase subunit delta narJ gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB gltD (family_assigned) — glutamate synthase subunit beta gltD purF (requalified) — amidophosphoribosyltransferase purF Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 Rv2857c (requalified) — 3-oxoacyl-ACP reductase Rv2857c Rv2859c (requalified) — gamma-glutamyl-gamma-aminobutyrate hydrolase Rv2859c aldC (requalified) — aldehyde dehydrogenase AldC aldC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.