MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0240 · 39 genes shown · anchor vapB24 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 vapB24 (requalified) — antitoxin vapB24 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 Rv2209 (requalified) — MFS transporter Rv2209 Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 lpqI (requalified) — lipoprotein LpqI lpqI fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 fadD29 (requalified) — long-chain-fatty-acid--AMP ligase FadD29 fadD29 pks15 (requalified) — polyketide synthase pks15 entC (requalified) — isochorismate synthase entC Rv0948c (requalified) — chorismate mutase Rv0948c Rv1885c (requalified) — chorismate mutase Rv1885c PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 Rv2775 (requalified) — GCN5-like N-acetyltransferase Rv2775 wbbL2 (family_assigned) — glycosyltransferase family 2 protein wbbL2 Rv0133 (family_assigned) — GNAT family N-acetyltransferase Rv0133 Rv2170 (requalified) — N-acetyltransferase Rv2170 espE (requalified) — type VII secretion system ESX-1 associated protein espE iniB (requalified) — isoniazid-induced protein IniB iniB Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE21 (family_assigned) — PPE family protein PPE21 PPE21 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 PPE35 (family_assigned) — PPE family protein PPE35 PPE35 PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.