MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0236c · 46 genes shown · anchor aftC · open gene page → · ← back to 1 hop

Evidence: Min score 0
aftD (family_assigned) — DUF3367 domain-containing protein aftD aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c mmpA (requalified) — hypothetical protein mmpA mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0227c (family_assigned) — membrane protein Rv0227c Rv0235c (family_assigned) — lipase maturation factor family protein Rv0235c pimE (requalified) — mannosyltransferase pimE Rv0236A (dark) — hypothetical protein Rv0236A Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c Rv0225 (family_assigned) — glycosyltransferase family 4 protein Rv0225 Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 embA (requalified) — arabinosyltransferase EmbA embA aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB embB (requalified) — arabinosyltransferase EmbB embB ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD Rv3802c (requalified) — phospholipase Rv3802c Rv0228 (requalified) — acyltransferase Rv0228 Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv3635 (family_assigned) — hypothetical protein Rv3635 mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtF (requalified) — peptide synthetase mbtF mbtE (requalified) — peptide synthetase mbtE mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtD (requalified) — mycobactin polyketide synthase MbtD mbtD mbtC (requalified) — polyketide synthetase MbtC mbtC Rv0954 (requalified) — DUF5336 domain-containing protein Rv0954 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv3668c (requalified) — protease Rv3668c lprC (family_assigned) — DUF3558 domain-containing protein lprC gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c lpqI (requalified) — lipoprotein LpqI lpqI Rv1158c (dark) — hypothetical protein Rv1158c Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 Rv1157c (dark) — hypothetical protein Rv1157c Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 lppM (requalified) — lipoprotein LppM lppM Rv2180c (family_assigned) — integral membrane protein Rv2180c Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c rsmA (requalified) — anti-sigma-M factor RsmA rsmA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.