MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0235c · 29 genes shown · anchor aftD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0235c (family_assigned) — lipase maturation factor family protein Rv0235c aftD (family_assigned) — DUF3367 domain-containing protein aftD gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 Rv0236A (dark) — hypothetical protein Rv0236A Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c lpqI (requalified) — lipoprotein LpqI lpqI aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c mmpA (requalified) — hypothetical protein mmpA mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0227c (family_assigned) — membrane protein Rv0227c gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 lppM (requalified) — lipoprotein LppM lppM Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 nirD (family_assigned) — nitrite reductase small subunit NirD nirD Rv1870c (family_assigned) — hypothetical protein Rv1870c rubA (requalified) — rubredoxin rubA rubB (requalified) — rubredoxin RubB rubB Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c lpqR (family_assigned) — M15 family metallopeptidase lpqR vapB24 (requalified) — antitoxin vapB24 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.