MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0229c · 45 genes shown · anchor php · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0229c (family_assigned) — PIN domain nuclease Rv0229c php (requalified) — phosphotriesterase-related protein php fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 chaA (requalified) — calcium:proton antiporter chaA vapB41 (requalified) — antitoxin VapB41 vapB41 vapB14 (requalified) — antitoxin vapB14 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 Rv0268c (family_assigned) — hypothetical protein Rv0268c Rv0366c (family_assigned) — zeta toxin family protein Rv0366c Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c Rv3662c (requalified) — oxidoreductase Rv3662c Rv0232 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0232 nrdB (requalified) — R2-like ligand-binding oxidase nrdB Rv2250A (family_assigned) — Possible flavoprotein Rv2250A Rv1635c (family_assigned) — glycosyltransferase family 39 protein Rv1635c ltp1 (requalified) — lipid-transfer protein ltp1 fadB (requalified) — fatty oxidation protein FadB fadB accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 echA16 (requalified) — enoyl-CoA hydratase echA16 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c Rv3387 (requalified) — transposase Rv3387 Rv2961 (requalified) — transposase Rv2961 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF impA (family_assigned) — inositol monophosphatase family protein impA hisI (requalified) — phosphoribosyl-AMP cyclohydrolase hisI hisA (requalified) — bifunctional 1-(5-phosphoribosyl)-5-((5-phosphorib hisA hisH (family_assigned) — imidazole glycerol phosphate synthase subunit HisH hisH vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC17 (family_assigned) — PIN domain-containing protein vapC17 vapC14 (requalified) — ribonuclease VapC14 vapC14

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.