MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0220 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lipC (requalified) — esterase LipC lipC Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 lipW (family_assigned) — alpha/beta hydrolase lipW Rv0221 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv0221 Rv0219 (dark) — hypothetical protein Rv0219 echA1 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA1 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c rpmD (requalified) — 50S ribosomal protein L30 rpmD lepB (requalified) — signal peptidase I lepB lipU (requalified) — lipase LipU lipU nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv0541c (family_assigned) — integral membrane protein Rv0541c lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c Rv1126c (family_assigned) — MarR family transcriptional regulator Rv1126c fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP rpsS (requalified) — 30S ribosomal protein S19 rpsS rnhB (requalified) — ribonuclease HII rnhB rplS (requalified) — 50S ribosomal protein L19 rplS Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c atpE (family_assigned) — F0F1 ATP synthase subunit C atpE ligD (requalified) — ATP-dependent DNA ligase ligD cbs (requalified) — cystathionine beta-synthase cbs Rv1075c (family_assigned) — SGNH/GDSL hydrolase family protein Rv1075c pra (family_assigned) — RDD family protein pra fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.