MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0214 · 46 genes shown · anchor pckA · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadD4 (requalified) — fatty-acid--CoA ligase FadD4 fadD4 fadD11 (requalified) — fatty-acid--CoA ligase FadD11 fadD11 fadD15 (requalified) — long-chain fatty acid--CoA ligase fadD15 fas (requalified) — fatty acid synthase fas lipY (requalified) — triacylglycerol lipase Lip lipY rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pckA (requalified) — phosphoenolpyruvate carboxykinase (GTP) pckA pks13 (requalified) — polyketide synthase Pks13 pks13 fadD11.1 (family_assigned) — Possible fatty-acid-CoA ligase FadD11.1 (fatty-aci fadD11.1 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 TB16.3 (family_assigned) — SRPBCC family protein TB16.3 Rv2184c (family_assigned) — hypothetical protein Rv2184c pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 tgs4 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs4 Rv3480c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3480c Rv3087 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3087 Rv2285 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv2285 Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB papA1 (requalified) — acyltransferase PapA1 papA1 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c pca (requalified) — pyruvate carboxylase pca pykA (requalified) — pyruvate kinase pykA mdh (requalified) — malate dehydrogenase mdh mqo (requalified) — malate dehydrogenase (quinone) mqo gltA2 (requalified) — citrate synthase gltA2 mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.