MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0213c · 46 genes shown · anchor nadR · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0213c (requalified) — methyltransferase Rv0213c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR ppk2 (requalified) — polyphosphate kinase ppk2 fadD4 (requalified) — fatty-acid--CoA ligase FadD4 fadD4 hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN Rv3729 (requalified) — transferase Rv3729 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv3377c (requalified) — type B diterpene cyclase Rv3377c vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv1833c (requalified) — haloalkane dehalogenase Rv1833c Rv0245 (family_assigned) — flavin reductase family protein Rv0245 cobB (requalified) — NAD-dependent protein deacylase cobB nadE (requalified) — NAD(+) synthase nadE ppnK (requalified) — NAD kinase ppnK pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 cinA (requalified) — competence/damage-inducible protein A cinA ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 ppa (requalified) — inorganic diphosphatase ppa Rv3231c (family_assigned) — hypothetical protein Rv3231c tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 Rv3233c (family_assigned) — Possible triacylglycerol synthase (diacylglycerol Rv3233c fadD11 (requalified) — fatty-acid--CoA ligase FadD11 fadD11 fadD15 (requalified) — long-chain fatty acid--CoA ligase fadD15 fas (requalified) — fatty acid synthase fas lipY (requalified) — triacylglycerol lipase Lip lipY rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD Rv2390c (family_assigned) — hypothetical protein Rv2390c Rv2879c (family_assigned) — Conserved hypothetical protein Rv2879c hemE (requalified) — uroporphyrinogen decarboxylase hemE gltB (family_assigned) — glutamate synthase large subunit gltB Rv2880c (family_assigned) — Conserved hypothetical protein Rv2880c Rv3728 (requalified) — MFS transporter Rv3728 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 Rv2541 (dark) — hypothetical protein Rv2541 iniB (requalified) — isoniazid-induced protein IniB iniB Rv2955c (requalified) — [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-r Rv2955c Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2209 (requalified) — MFS transporter Rv2209

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.