MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0198c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap Rv0457c (family_assigned) — prolyl oligopeptidase family protein Rv0457c embA (requalified) — arabinosyltransferase EmbA embA embB (requalified) — arabinosyltransferase EmbB embB embC (requalified) — arabinosyltransferase EmbC embC echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC ligA (requalified) — NAD-dependent DNA ligase LigA ligA clpB (requalified) — chaperone protein ClpB clpB vapC40 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC40 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 Rv3351c (family_assigned) — hypothetical protein Rv3351c Rv2280 (family_assigned) — Probable dehydrogenase Rv2280 Rv1774 (requalified) — FAD-binding oxidoreductase Rv1774 Rv1257c (family_assigned) — FAD-linked oxidase C-terminal domain-containing pr Rv1257c Rv1771 (requalified) — L-gulono-1%2C4-lactone dehydrogenase Rv1771 Rv1500 (family_assigned) — glycosyltransferase family 2 protein Rv1500 Rv1502 (family_assigned) — hypothetical protein Rv1502 Rv1499 (requalified) — glycosyltransferase (part1) Rv1499 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 pgk (requalified) — phosphoglycerate kinase pgk tpi (requalified) — triose-phosphate isomerase tpi fba (requalified) — class II fructose-bisphosphate aldolase fba eno (requalified) — phosphopyruvate hydratase eno pgi (requalified) — glucose-6-phosphate isomerase pgi tkt (requalified) — transketolase tkt Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0459 (family_assigned) — DUF779 domain-containing protein Rv0459

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.