MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0196 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0196 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0196 Rv0197 (requalified) — oxidoreductase Rv0197 Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv0195 (requalified) — response regulator transcription factor Rv0195 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 Rv0784 (family_assigned) — hypothetical protein Rv0784 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 Rv1057 (family_assigned) — YncE family protein Rv1057 Rv2781c (requalified) — nitronate monooxygenase Rv2781c Rv1139c (family_assigned) — isoprenylcysteine carboxyl methyltransferase famil Rv1139c Rv3572 (family_assigned) — hypothetical protein Rv3572 qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 gltB (family_assigned) — glutamate synthase large subunit gltB Rv0295c (family_assigned) — Stf0 family sulfotransferase Rv0295c moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 dinP (requalified) — DNA polymerase IV dinP Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv0737 (family_assigned) — MarR family transcriptional regulator Rv0737 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c embR (requalified) — response regulator transcription factor EmbR embR Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 Rv0193c (family_assigned) — hypothetical protein Rv0193c narL (requalified) — two-component system response regulator NarL narL devR (requalified) — two-component system response regulator DevR devR dosT (requalified) — two-component system sensor histidine kinase DosT dosT rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv3092c (family_assigned) — DUF808 domain-containing protein Rv3092c Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv2405 (family_assigned) — hypothetical protein Rv2405 Rv1931c (family_assigned) — transcriptional regulator Rv1931c fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp Rv0100 (requalified) — acyl carrier protein Rv0100

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.