MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0194 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 Rv0193c (family_assigned) — hypothetical protein Rv0193c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0195 (requalified) — response regulator transcription factor Rv0195 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr virS (family_assigned) — AraC family transcriptional regulator virS Rv0603 (family_assigned) — hypothetical protein Rv0603 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv3114 (requalified) — nucleoside deaminase Rv3114 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 embR (requalified) — response regulator transcription factor EmbR embR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 narL (requalified) — two-component system response regulator NarL narL devR (requalified) — two-component system response regulator DevR devR dosT (requalified) — two-component system sensor histidine kinase DosT dosT Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 lpqO (family_assigned) — DUF1259 domain-containing protein lpqO cobB (requalified) — NAD-dependent protein deacylase cobB Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS prrB (requalified) — two-component system sensor histidine kinase PrrB prrB kdpE (requalified) — two-component system response regulator KdpE kdpE Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 htpG (requalified) — molecular chaperone HtpG htpG mycP4 (requalified) — type VII secretion system ESX-4 serine protease my mycP4 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.