MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0175 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177 mce1F (family_assigned) — MCE family protein mce1F mce1C (family_assigned) — MCE family protein mce1C mce1B (family_assigned) — virulence factor Mce family protein mce1B marP (requalified) — acid resistance serine protease MarP marP ripC (requalified) — peptidoglycan hydrolase RipC ripC rpsE (requalified) — 30S ribosomal protein S5 rpsE cdsA (requalified) — phosphatidate cytidylyltransferase cdsA rplC (requalified) — 50S ribosomal protein L3 rplC yrbE1A (family_assigned) — ABC transporter permease yrbE1A phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 mce1D (family_assigned) — virulence factor Mce family protein mce1D mce1A (family_assigned) — Mce family protein Mce1A mce1A pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC lprK (family_assigned) — virulence factor Mce family protein lprK yrbE1B (family_assigned) — ABC transporter permease yrbE1B Rv3672c (requalified) — CoA pyrophosphatase Rv3672c mpa (requalified) — proteasome ATPase mpa nth (requalified) — endonuclease III nth glpK (requalified) — glycerol kinase GlpK glpK mec (requalified) — CysO-cysteine peptidase mec Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c Rv2189c (dark) — hypothetical protein Rv2189c fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA pimB (requalified) — GDP-mannose-dependent alpha-(1-6)-phosphatidylinos pimB rpsM (requalified) — 30S ribosomal protein S13 rpsM rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c Rv2252 (requalified) — diacylglycerol kinase Rv2252 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.