MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0165c · 46 genes shown · anchor fadD5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mce1R (family_assigned) — transcriptional regulator Mce1R mce1R fadD5 (requalified) — fatty-acid--CoA ligase FadD5 fadD5 ilvN (family_assigned) — acetolactate synthase small subunit ilvN Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv1719 (family_assigned) — IclR family transcriptional regulator Rv1719 Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 yrbE1A (family_assigned) — ABC transporter permease yrbE1A mce2R (family_assigned) — FadR family transcriptional regulator Mce2R mce2R mce1C (family_assigned) — MCE family protein mce1C mce1D (family_assigned) — virulence factor Mce family protein mce1D Rv1200 (family_assigned) — MHS family MFS transporter Rv1200 hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK mce1A (family_assigned) — Mce family protein Mce1A mce1A yrbE1B (family_assigned) — ABC transporter permease yrbE1B lprK (family_assigned) — virulence factor Mce family protein lprK ilvB1 (family_assigned) — acetolactate synthase large subunit IlvB ilvB1 ilvC (requalified) — ketol-acid reductoisomerase ilvC ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 ilvG (requalified) — acetolactate synthase ilvG ilvX (family_assigned) — acetolactate synthase large subunit ilvX leuB (requalified) — 3-isopropylmalate dehydrogenase leuB ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 embR (requalified) — response regulator transcription factor EmbR embR Rv1931c (family_assigned) — transcriptional regulator Rv1931c fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mce1B (family_assigned) — virulence factor Mce family protein mce1B mce1F (family_assigned) — MCE family protein mce1F mkl (family_assigned) — ABC transporter ATP-binding protein mkl yrbE2A (family_assigned) — ABC transporter permease yrbE2A Rv0588 (family_assigned) — ABC transporter permease Rv0588

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.