MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0160c · 36 genes shown · anchor PE3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE4 (family_assigned) — PE family protein PE4 PE4 PE3 (family_assigned) — PE family protein PE3 PE3 Rv0161 (requalified) — FAD-binding oxidoreductase Rv0161 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c chp2 (requalified) — diacyltrehalose acyltransferase Chp2 chp2 PE36 (family_assigned) — PE family protein PE36 PE36 PE35 (family_assigned) — PE family protein PE35 PE35 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 mmpL10 (requalified) — RND transporter MmpL10 mmpL10 chp1 (requalified) — sulfolipid-1 biosynthesis membrane-anchored acyltr chp1 fadD21 (requalified) — fatty-acid--AMP ligase FAAL21/FadD21 fadD21 papA3 (requalified) — acyltransferase PapA3 papA3 lipF (requalified) — carboxylesterase LipF lipF papA1 (requalified) — acyltransferase PapA1 papA1 PPE69 (family_assigned) — PPE family protein PPE69 PPE69 esxD (family_assigned) — WXG100 family type VII secretion target esxD esxC (family_assigned) — WXG100 family type VII secretion target esxC eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 Rv3896c (requalified) — transglycosylase Rv3896c PPE68 (family_assigned) — PPE family protein PPE68 PPE68 eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.