MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0144 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0144 (family_assigned) — transcriptional regulator Rv0144 Rv0146 (requalified) — class I SAM-dependent methyltransferase Rv0146 Rv0145 (requalified) — class I SAM-dependent methyltransferase Rv0145 Rv0143c (requalified) — chloride channel protein Rv0143c bpoB (requalified) — peroxidase BpoB bpoB Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 Rv0078 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0078 pth (requalified) — aminoacyl-tRNA hydrolase pth rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv0373c (family_assigned) — aerobic carbon-monoxide dehydrogenase large subuni Rv0373c Rv0149 (family_assigned) — NADPH:quinone oxidoreductase family protein Rv0149 Rv1762c (family_assigned) — heavy metal-binding domain-containing protein Rv1762c helZ (requalified) — DEAD/DEAH box helicase helZ gadB (requalified) — glutamate decarboxylase gadB ephC (requalified) — epoxide hydrolase EphC ephC Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA fadB (requalified) — fatty oxidation protein FadB fadB ackA (requalified) — acetate kinase ackA adhB (requalified) — alcohol dehydrogenase B adhB htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv3538 (requalified) — dehydrogenase Rv3538 fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 fas (requalified) — fatty acid synthase fas Rv0077c (family_assigned) — alpha/beta hydrolase Rv0077c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0076c (family_assigned) — membrane protein Rv0076c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.