MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0130 · 46 genes shown · anchor fadB4 · open gene page → · ← back to 1 hop

Evidence: Min score 0
htdZ (requalified) — 3-hydroxyacyl-thioester dehydratase HtdZ htdZ fadB4 (family_assigned) — NADPH:quinone oxidoreductase family protein fadB4 Rv0149 (family_assigned) — NADPH:quinone oxidoreductase family protein Rv0149 fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 fadE34 (requalified) — acyl-CoA dehydrogenase fadE34 fadE6 (family_assigned) — acyl-CoA dehydrogenase family protein fadE6 Rv0148 (family_assigned) — SDR family oxidoreductase Rv0148 fadB (requalified) — fatty oxidation protein FadB fadB pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 pks9 (requalified) — type I polyketide synthase pks9 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0146 (requalified) — class I SAM-dependent methyltransferase Rv0146 fadE36 (family_assigned) — phosphotransferase family protein fadE36 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 echA13 (requalified) — enoyl-CoA hydratase echA13 fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 mce3A (family_assigned) — Mce family protein Mce3A mce3A yrbE3B (family_assigned) — ABC transporter permease yrbE3B acn (requalified) — iron-regulated aconitate hydratase Acn acn Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c mdh (requalified) — malate dehydrogenase mdh ltp1 (requalified) — lipid-transfer protein ltp1 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 kstR (family_assigned) — cholesterol catabolism transcriptional regulator K kstR ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp2 (requalified) — lipid-transfer protein ltp2 ltp3 (family_assigned) — thiolase domain-containing protein ltp3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.