MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0117 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1931c (family_assigned) — transcriptional regulator Rv1931c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 kdpE (requalified) — two-component system response regulator KdpE kdpE Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c embR (requalified) — response regulator transcription factor EmbR embR Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1359 (family_assigned) — transcriptional regulator Rv1359 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv1930c (requalified) — glutamine amidotransferase Rv1930c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c kdpD (requalified) — sensor histidine kinase KdpD kdpD trcR (requalified) — two-component system response regulator TrcR trcR trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv0894 (family_assigned) — hypothetical protein Rv0894 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 dinP (requalified) — DNA polymerase IV dinP Rv0737 (family_assigned) — MarR family transcriptional regulator Rv0737 Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.