MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0113 · 46 genes shown · anchor hddA · open gene page → · ← back to 1 hop

Evidence: Min score 0
gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB gca (requalified) — GDP-mannose 4%2C6-dehydratase gca mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv3032 (requalified) — glycogen synthase Rv3032 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv1514c (family_assigned) — glycosyltransferase family 2 protein Rv1514c kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB aroB (requalified) — 3-dehydroquinate synthase aroB darT (requalified) — toxin-antitoxin system toxin DarT darT manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA ligD (requalified) — ATP-dependent DNA ligase ligD ligB (requalified) — ATP-dependent DNA ligase ligB ligC (requalified) — ATP-dependent DNA ligase ligC gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA epiA (requalified) — GDP-L-fucose synthase epiA rpsS (requalified) — 30S ribosomal protein S19 rpsS Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv0485 (family_assigned) — transcriptional regulator Rv0485 Rv3031 (family_assigned) — glycoside hydrolase family 57 protein Rv3031 Rv3030 (family_assigned) — methyltransferase domain-containing protein Rv3030 glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU otsA (requalified) — trehalose-6-phosphate synthase otsA dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK dnaB (requalified) — replicative DNA helicase dnaB recF (requalified) — DNA replication/repair protein RecF recF parA (requalified) — chromosome partitioning protein ParA parA Rv3213c (family_assigned) — AAA family ATPase Rv3213c rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv1510 (family_assigned) — hypothetical protein Rv1510 pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.