MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0111 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0111 (family_assigned) — acyltransferase family protein Rv0111 Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c Rv0228 (requalified) — acyltransferase Rv0228 Rv1254 (requalified) — acyltransferase Rv1254 Rv0110 (family_assigned) — integral membrane protein Rv0110 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c gca (requalified) — GDP-mannose 4%2C6-dehydratase gca erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c galE1 (requalified) — UDP-glucose 4-epimerase galE1 Rv1366 (family_assigned) — GTP pyrophosphokinase family protein Rv1366 Rv0140 (family_assigned) — DUF427 domain-containing protein Rv0140 Rv0274 (family_assigned) — VOC family protein Rv0274 lprE (family_assigned) — LppP/LprE family lipoprotein lprE hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM deaD (requalified) — DEAD/DEAH box helicase deaD Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 mmpA (requalified) — hypothetical protein mmpA Rv0227c (family_assigned) — membrane protein Rv0227c Rv3802c (requalified) — phospholipase Rv3802c Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c fbpD (requalified) — MPT51/MPB51 antigen fbpD Rv3635 (family_assigned) — hypothetical protein Rv3635 Rv3906c (requalified) — pullulanase Rv3906c Rv3035 (family_assigned) — hypothetical protein Rv3035 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 Rv0108c (family_assigned) — hypothetical protein Rv0108c ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c PE_PGRS1 (family_assigned) — PE-PGRS family protein PE_PGRS1 PE_PGRS1 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA epiA (requalified) — GDP-L-fucose synthase epiA rpsS (requalified) — 30S ribosomal protein S19 rpsS Rv3377c (requalified) — type B diterpene cyclase Rv3377c phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv1815 (family_assigned) — hypothetical protein Rv1815

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.