MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0109 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS1 (family_assigned) — PE-PGRS family protein PE_PGRS1 PE_PGRS1 Rv0110 (family_assigned) — integral membrane protein Rv0110 Rv0108c (family_assigned) — hypothetical protein Rv0108c zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv0102 (requalified) — cytochrome c oxidase assembly protein Rv0102 PPE1 (family_assigned) — PPE family protein PPE1 PPE1 nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 Rv0100 (requalified) — acyl carrier protein Rv0100 fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT Rv0052 (family_assigned) — hypothetical protein Rv0052 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c ctpI (requalified) — cation-transporter ATPase I ctpI Rv0863 (family_assigned) — hypothetical protein Rv0863 Rv0546c (family_assigned) — VOC family protein Rv0546c birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 ctaE (family_assigned) — heme-copper oxidase subunit III ctaE fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 Rv0095c (family_assigned) — hypothetical protein Rv0095c pks13 (requalified) — polyketide synthase Pks13 pks13 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 Rv1931c (family_assigned) — transcriptional regulator Rv1931c rpsF (requalified) — 30S ribosomal protein S6 rpsF lexA (requalified) — transcriptional repressor LexA lexA sigA (requalified) — RNA polymerase sigma factor sigA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.