MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0108c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0108c (family_assigned) — hypothetical protein Rv0108c Rv0110 (family_assigned) — integral membrane protein Rv0110 PE_PGRS1 (family_assigned) — PE-PGRS family protein PE_PGRS1 PE_PGRS1 ctpI (requalified) — cation-transporter ATPase I ctpI Rv0863 (family_assigned) — hypothetical protein Rv0863 Rv0546c (family_assigned) — VOC family protein Rv0546c birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv0180c (family_assigned) — YhgE/Pip domain-containing protein Rv0180c Rv1779c (dark) — DUF4407 domain-containing protein Rv1779c Rv2961 (requalified) — transposase Rv2961 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 Rv0102 (requalified) — cytochrome c oxidase assembly protein Rv0102 PPE1 (family_assigned) — PPE family protein PPE1 PPE1 nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 mycP2 (requalified) — type VII secretion system ESX-2 serine protease my mycP2 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 mgtC (family_assigned) — MgtC/SapB family protein mgtC Rv3008 (family_assigned) — MgtC/SapB family protein Rv3008 Rv2876 (requalified) — transmembrane protein Rv2876 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrA (requalified) — hypothetical protein qcrA Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c pitA (requalified) — anion permease pitA Rv0544c (family_assigned) — hypothetical protein Rv0544c Rv1473A (family_assigned) — transcriptional regulator Rv1473A menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 bioB (requalified) — biotin synthase BioB bioB bisC (requalified) — molybdopterin guanine dinucleotide-containing S/N- bisC accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 Rv1722 (requalified) — biotin carboxylase Rv1722 Rv0181c (family_assigned) — pirin family protein Rv0181c Rv1006 (family_assigned) — hypothetical protein Rv1006 hsr1 (requalified) — hypothetical protein hsr1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.