MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0103c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ctpB (requalified) — cation-translocating P-type ATPase ctpB ctpA (requalified) — heavy metal translocating P-type ATPase ctpA Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 sodC (family_assigned) — superoxide dismutase family protein sodC ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324 ctpH (requalified) — cation-translocating P-type ATPase ctpH mmcO (requalified) — multicopper oxidase MmcO mmcO Rv0190 (family_assigned) — metal-sensitive transcriptional regulator Rv0190 ctpI (requalified) — cation-transporter ATPase I ctpI csoR (requalified) — copper-sensing transcriptional repressor CsoR csoR ctpF (requalified) — cation-transporting P-type ATPase ctpF mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdD (family_assigned) — fumarate reductase subunit FrdD frdD Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2876 (requalified) — transmembrane protein Rv2876 qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1722 (requalified) — biotin carboxylase Rv1722 rpe (requalified) — ribulose-phosphate 3-epimerase rpe cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 embR (requalified) — response regulator transcription factor EmbR embR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv0326 (family_assigned) — hypothetical protein Rv0326 Rv0325 (family_assigned) — hypothetical protein Rv0325 arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC sodA (requalified) — superoxide dismutase sodA Rv0323c (family_assigned) — PIG-L deacetylase family protein Rv0323c Rv2367c (requalified) — endoribonuclease Rv2367c Rv2851c (family_assigned) — GNAT family N-acetyltransferase Rv2851c Rv0426c (dark) — hypothetical protein Rv0426c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.