MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0100 · 38 genes shown · anchor nrp · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0100 (requalified) — acyl carrier protein Rv0100 nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT PPE1 (family_assigned) — PPE family protein PPE1 PPE1 Rv0095c (family_assigned) — hypothetical protein Rv0095c Rv0102 (requalified) — cytochrome c oxidase assembly protein Rv0102 ctpB (requalified) — cation-translocating P-type ATPase ctpB fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 PE_PGRS1 (family_assigned) — PE-PGRS family protein PE_PGRS1 PE_PGRS1 pks13 (requalified) — polyketide synthase Pks13 pks13 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 ctaE (family_assigned) — heme-copper oxidase subunit III ctaE ctpA (requalified) — heavy metal translocating P-type ATPase ctpA Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 sodC (family_assigned) — superoxide dismutase family protein sodC ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324 fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 menE (requalified) — o-succinylbenzoate--CoA ligase menE Rv0110 (family_assigned) — integral membrane protein Rv0110 Rv0108c (family_assigned) — hypothetical protein Rv0108c zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.